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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888977.1_cds_XP_016443631.1_38771
CDS Infomation

[gene=LOC107768963] [db_xref=GeneID:107768963] [protein=2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X3] [protein_id=XP_016443631.1] [location=complement(join(60891..61058,61150..61332,61885..62024,62119..62230,62545..62644,62753..62910,63377..63559,63774..63869))] [gbkey=CDS]
Sequence

ATGAAATTCATTCCTGAATCATCCGAAACAAGGTTAGCTTGTTATCGAGTTCTTGACAAA
AATGGCTATCCAATTCCAGGCAGTGTATTCGAGCAGGTGAGCAAAGATTTAGCAGTGAAA
ATGTATAGAAAAATGGTTACCCTTCAAATTATGGACAGCATTTTCGATGAAGCAAAAAAA
CAGGGCAGGTTATCCTTTTATTTAACAACTCTTGGAGAAGAAGTCATAAACATAGCTTCT
GCTGCTGCCCTCACCTCAGATGACATTGTGTTGCCTCAGTACAGGGAGCCCGGGGTTCTC
TTATGGCGTGGCTTCACCCTACAAGAATTTGCCAATCAATTGCTAGGAAACAAGGGTGAC
AATGGGAAAGGAAGGCAAATGCCAATACATTATGGTTCTAACAAGCTCAATTACTTCACC
GTTTCTTCAACTATAGCCACACAGCTTCCACAGGCAGTAGGCGTGGCTTATTCTCTGAAA
ATGGACACAAAAGAGGCTTGTGTTGTCACTTATTTTGGAGATGGTACCACTAGTGAGGGA
GATTTCCATGCTGCTTTGAATCTTGCAGCAGTTCTGGAAGTTCCTGTTATATTTGTATGC
CGCAATAATGGATGGGCAATTAGCACCCCTGTGGCCGAACAATTTCGAAGTGATGGAATC
GCGATTAAAGGGCAAGCTTATGGAGTTCGAAGCATTCGAGTGGATGGCAATGATGCTCTT
GCAGTTTATAGTGCTATTCGTGCTGCTCGTAAAATGGCAATAAAGGAACAAAGGCCAATA
TTAGTCGAGGCCATGGCTTATCGAGTGGGCGACCATGCATCGTCTGATGATTCTACCAAG
TACCGATCCAAGGAGGAAATTGAGTACTGGAGAAGACGAAGCTCAGTCGCCAGATTCAGA
AAATGGATACAGAAAAATGGTTGGTGGAGTGATGTAGAGGAATTCGAATTCCGGGGAAAT
ATCAGAGAGCAGGTGTTGCAAGCAATTCAAGTTGCTGAGAAAGAAGAGAAACCTCCGTTG
GTAGATTTGTTTACAGATGTTTATGACCAAATACCATCAAATCTTCAAGAACAAGAGAGG
TATATTAGAGATGCTGTGAAGAGAGGTCCAAAAGAGTATCCTTCTAATATGACTCTATAG

Peptide Sequence

PEP ID

XP_016443631.1
PEP Infomation

PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X3 [Nicotiana tabacum]
Sequence

MKFIPESSETRLACYRVLDKNGYPIPGSVFEQVSKDLAVKMYRKMVTLQIMDSIFDEAKK
QGRLSFYLTTLGEEVINIASAAALTSDDIVLPQYREPGVLLWRGFTLQEFANQLLGNKGD
NGKGRQMPIHYGSNKLNYFTVSSTIATQLPQAVGVAYSLKMDTKEACVVTYFGDGTTSEG
DFHAALNLAAVLEVPVIFVCRNNGWAISTPVAEQFRSDGIAIKGQAYGVRSIRVDGNDAL
AVYSAIRAARKMAIKEQRPILVEAMAYRVGDHASSDDSTKYRSKEEIEYWRRRSSVARFR
KWIQKNGWWSDVEEFEFRGNIREQVLQAIQVAEKEEKPPLVDLFTDVYDQIPSNLQEQER
YIRDAVKRGPKEYPSNMTL

Transcript Sequence

Gene sequence data has not been registered.